STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacPenicillin G acylase precursor. (935 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
  
 0.655
T45_06435
Actinorhodin polyketide synthase acyl carrier.
  
    0.565
T45_03496
Hypothetical protein.
       0.550
T45_03497
Hypothetical protein.
       0.550
csn_2
Chitosanase precursor; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
     0.449
csn_3
Chitosanase precursor; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
     0.438
kstR2_5
HTH-type transcriptional repressor KstR2.
 
     0.437
csn_1
Chitosanase precursor; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
     0.431
T45_06964
Hypothetical protein.
  
     0.406
phoR_1
Alkaline phosphatase synthesis sensor protein.
  
     0.401
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.