Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (452 aa)    
Predicted Functional Partners:
hpd
4-hydroxyphenylpyruvate dioxygenase.
 
 0.997
T45_02355
4-hydroxymandelate synthase.
 
 0.983
fahA
Fumarylacetoacetate (FAA hydrolase family.
 
  
 0.977
lly
4-hydroxyphenylpyruvate dioxygenase.
 
 0.935
mce
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein.
  
 0.879
T45_09059
Hypothetical protein.
  
 0.848
yvoA_6
HTH-type transcriptional repressor YvoA.
       0.830
T45_03515
Hypothetical protein.
       0.792
tetR_3
Tetracycline repressor protein class G.
       0.761
tfdF
Maleylacetate reductase.
   
  0.692
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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