Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03515Hypothetical protein. (388 aa)    
Predicted Functional Partners:
yvoA_6
HTH-type transcriptional repressor YvoA.
       0.830
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
       0.792
T45_02117
Hypothetical protein.
  
     0.764
T45_08389
Hypothetical protein.
  
     0.758
T45_08388
Hypothetical protein.
  
     0.722
T45_03628
Hypothetical protein.
  
     0.714
tetR_3
Tetracycline repressor protein class G.
       0.709
T45_08654
Hypothetical protein.
  
     0.700
afsR_3
Regulatory protein AfsR.
  
     0.688
T45_03327
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.673
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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