Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03516Hypothetical protein. (237 aa)    
Predicted Functional Partners:
drrB_4
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
       0.769
drrA_9
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
       0.594
T45_04636
Hypothetical protein.
  
     0.590
tetR_2
Tetracycline repressor protein class E.
  
     0.525
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.508
sigG
ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.479
cph2_2
Phytochrome-like protein cph2.
  
  
 0.465
gmr_1
Cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.465
tetR_1
Tetracycline repressor protein class H.
  
   
 0.424
T45_04676
Hypothetical protein.
  
     0.420
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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