Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03523Hypothetical protein. (513 aa)    
Predicted Functional Partners:
T45_03524
Tetratricopeptide repeat protein.
 
    0.934
rcnA
Nickel/cobalt efflux system RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.922
T45_03521
anti-sigma-K factor RskA.
 
     0.782
bprV
Extracellular basic protease precursor.
 
 
 0.780
T45_04327
Tetratricopeptide repeat protein.
 
    0.764
sigK_3
ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.684
T45_03520
Hypothetical protein.
       0.670
T45_01607
Hypothetical protein.
    
   0.558
T45_02385
Hypothetical protein.
 
  
  0.481
T45_00641
Putative peptidoglycan binding domain protein.
    
 0.462
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.