Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_03524Tetratricopeptide repeat protein. (622 aa)    
Predicted Functional Partners:
rcnA
Nickel/cobalt efflux system RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.969
T45_03523
Hypothetical protein.
 
    0.934
barA_2
Signal transduction histidine-protein kinase.
 
 
 0.846
yrrB
TPR repeat-containing protein YrrB.
  
 0.838
ribBA_1
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.811
T45_03521
anti-sigma-K factor RskA.
 
     0.747
ndkA
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.637
T45_05343
Hypothetical protein.
 
 
  0.629
T45_03520
Hypothetical protein.
       0.620
mazG
Nucleoside triphosphate pyrophosphohydrolase.
     
  0.612
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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