Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rcnANickel/cobalt efflux system RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. (609 aa)    
Predicted Functional Partners:
T45_03524
Tetratricopeptide repeat protein.
 
     0.969
T45_03523
Hypothetical protein.
 
     0.922
T45_04327
Tetratricopeptide repeat protein.
 
     0.774
T45_03521
anti-sigma-K factor RskA.
 
     0.727
T45_03520
Hypothetical protein.
       0.620
T45_04182
Hypothetical protein.
  
     0.573
T45_08340
Hypothetical protein.
  
     0.569
T45_04015
Hypothetical protein.
  
     0.559
T45_08780
Hypothetical protein.
  
     0.554
T45_05006
Hypothetical protein.
  
     0.545
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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