Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
epsHPutative glycosyltransferase EpsH. (335 aa)    
Predicted Functional Partners:
T45_03531
Undecaprenyl-phosphate mannosyltransferase.
 
  
  0.968
T45_03534
Hypothetical protein.
 
  
 0.953
pgaB
poly-beta-1,6-N-acetyl-D-glucosamine.
 
    0.871
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
  
 
 0.807
T45_03530
Hypothetical protein.
 
     0.782
T45_03529
Hypothetical protein.
       0.686
yrrB
TPR repeat-containing protein YrrB.
 
 
 0.633
T45_02729
Undecaprenyl-phosphate mannosyltransferase.
 
 
 0.592
T45_03536
ATPase family associated with various cellular activities.
 
     0.582
soj_1
Sporulation initiation inhibitor protein Soj.
  
 
 0.575
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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