Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_03552Hypothetical protein. (260 aa)    
Predicted Functional Partners:
sprB
streptogrisin-B precursor.
       0.702
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
     
 0.626
barA_2
Signal transduction histidine-protein kinase.
     
 0.626
T45_03554
Hypothetical protein.
 
     0.612
fliY
Cystine-binding periplasmic protein precursor.
 
     0.611
sprD_1
streptogrisin-D precursor.
       0.595
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
    0.522
tcyC_2
L-cystine import ATP-binding protein TcyC.
       0.519
ntaA_2
Nitrilotriacetate monooxygenase component A.
       0.516
T45_04227
SPFH domain / Band 7 family protein.
  
   
 0.482
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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