Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_03606Cyclic nucleotide-binding domain protein. (151 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.876
barA_2
Signal transduction histidine-protein kinase.
   
 0.861
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.773
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
     
  0.767
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.754
crp_2
CAMP receptor protein.
     
  0.743
accA
Acetyl-coenzyme A carboxylase carboxyl.
    
  0.738
T45_01116
Hypothetical protein.
    
 0.728
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.726
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
   
 0.719
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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