Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
T45_03608Bacterial regulatory proteins, tetR family. (243 aa)    
Predicted Functional Partners:
T45_03609
Carboxynorspermidine synthase.
 
     0.806
T45_05859
Putative glutaredoxin.1/MT3292.
  
     0.671
entS_1
Enterobactin exporter EntS.
       0.668
T45_00197
Hypothetical protein.
  
     0.624
T45_01908
Hypothetical protein.
  
     0.593
T45_06528
Hypothetical protein.
  
     0.565
T45_06712
Hypothetical protein.
  
     0.544
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.508
tetR_2
Tetracycline repressor protein class E.
  
     0.505
T45_02270
Saccharopine dehydrogenase.
  
     0.484
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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