Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_03680Extracellular serine protease precursor. (646 aa)    
Predicted Functional Partners:
T45_03681
Dolichyl-phosphate-mannose-protein.
 
    0.768
T45_03679
BadF/BadG/BcrA/BcrD ATPase family protein.
       0.712
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.676
dhbF_8
Dimodular nonribosomal peptide synthase.
   
 0.660
T45_03682
Putative DNA-binding transcriptional regulator.
       0.655
mak_2
Fructokinase.
       0.616
epsL
Putative sugar transferase EpsL.
  
 
 0.592
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.592
T45_06685
Leucine rich repeat variant.
  
     0.517
T45_07972
Fatty acid hydroxylase superfamily protein.
    
  0.517
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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