Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
subB_3Ferredoxin-2. (62 aa)    
Predicted Functional Partners:
adc
Putative acetoacetate decarboxylase.
 
     0.928
camA_2
Putidaredoxin reductase.
 
  
 0.907
hpcB
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
     0.850
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.813
hpcE_1
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase.
 
     0.770
glnA_2
Glutamine synthetase.
 
     0.741
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.735
accA
Acetyl-coenzyme A carboxylase carboxyl.
     
  0.732
kstR2_6
HTH-type transcriptional repressor KstR2.
       0.730
mutB_2
methylmalonyl-CoA mutase large subunit.
     
 0.607
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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