STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_03704Hypothetical protein. (865 aa)    
Predicted Functional Partners:
T45_04719
Pectate lyase superfamily protein.
  
     0.729
T45_07785
Hypothetical protein.
  
     0.643
T45_01612
Hypothetical protein.
  
     0.627
T45_05708
Hypothetical protein.
  
     0.555
T45_02690
Zinc carboxypeptidase.
  
     0.542
cobD_1
Threonine-phosphate decarboxylase.
  
     0.525
T45_02692
Zinc carboxypeptidase.
  
     0.513
telA
Toxic anion resistance protein (TelA).
  
     0.478
T45_04865
F5/8 type C domain protein.
  
     0.457
liaR_6
Transcriptional regulatory protein LiaR.
  
     0.446
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.