Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gudXGlucarate dehydratase-related protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (432 aa)    
Predicted Functional Partners:
T45_03707
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.984
T45_09262
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.932
T45_02372
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.919
dgoD_2
D-galactonate dehydratase.
  
  
 
0.786
aldA
Putative aldehyde dehydrogenase AldA.
     
  0.770
rspA
Starvation-sensing protein RspA; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
  0.768
lipO_1
Lipoprotein LipO precursor.
 
     0.738
ycjO_3
Inner membrane ABC transporter permease protein.
       0.717
ykfB
L-Ala-D/L-Glu epimerase.
  
  
  0.688
araQ_11
L-arabinose transport system permease protein.
       0.681
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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