STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_03718Glycosyl hydrolase family 109 protein 1. (406 aa)    
Predicted Functional Partners:
yesO_1
Putative ABC transporter substrate-binding.
 
     0.899
araQ_12
L-arabinose transport system permease protein.
 
     0.812
lacF_13
Lactose transport system permease protein LacF.
 
     0.794
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.780
fdtB
dTDP-3-amino-3, 6-dideoxy-alpha-D-galactopyranose; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.774
T45_03713
Hypothetical protein.
       0.651
msmE_12
Multiple sugar-binding protein precursor.
  
     0.635
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.633
T45_01987
3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase.
   
 
  0.632
qorB_1
Quinone oxidoreductase 2.
   
 
  0.632
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.