Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fas4_1Adenylate dimethylallyltransferase. (256 aa)    
Predicted Functional Partners:
fas6_1
LOG family protein ORF6 in fasciation locus.
  
    0.799
fas5_1
Putative oxidoreductase ORF5 in fasciation locus.
     
 0.792
T45_02614
Hypothetical protein.
  
     0.758
T45_00706
Hypothetical protein.
  
     0.718
nagJ_1
O-GlcNAcase NagJ precursor.
  
     0.677
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.645
T45_01114
Hypothetical protein.
  
     0.639
T45_06097
Glyoxalase-like domain protein.
  
     0.639
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.627
bmrA
Multidrug resistance ABC transporter ATP-binding/permease protein BmrA.
       0.603
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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