STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cel1Cellulase 1 precursor. (747 aa)    
Predicted Functional Partners:
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 0.921
T45_06173
Endoglucanase E1 precursor.
 
 0.916
cbhA
Exoglucanase A precursor; Belongs to the glycosyl hydrolase family 6.
  
  
  0.914
celA
Endoglucanase CelA precursor.
  
  
  0.878
bglB
Thermostable beta-glucosidase B.
     
  0.850
cenA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase family 6.
     
  0.850
bglX_3
Periplasmic beta-glucosidase precursor.
     
  0.850
bglA_3
Beta-glucosidase A; Belongs to the glycosyl hydrolase 1 family.
    
  0.846
T45_00216
Cellulase (glycosyl hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.833
xyl3A_2
Xylan 1,4-beta-xylosidase precursor.
  
  
  0.825
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.