Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_02460 | T45_02659 | T45_02460 | T45_02659 | PQQ enzyme repeat protein. | Hypothetical protein. | 0.519 |
T45_02460 | T45_03805 | T45_02460 | T45_03805 | PQQ enzyme repeat protein. | Hypothetical protein. | 0.477 |
T45_02460 | T45_06032 | T45_02460 | T45_06032 | PQQ enzyme repeat protein. | Phosphotransferase enzyme family protein. | 0.732 |
T45_02659 | T45_02460 | T45_02659 | T45_02460 | Hypothetical protein. | PQQ enzyme repeat protein. | 0.519 |
T45_02659 | T45_03805 | T45_02659 | T45_03805 | Hypothetical protein. | Hypothetical protein. | 0.438 |
T45_02659 | T45_05301 | T45_02659 | T45_05301 | Hypothetical protein. | Hypothetical protein. | 0.579 |
T45_03482 | T45_03805 | T45_03482 | T45_03805 | Hypothetical protein. | Hypothetical protein. | 0.509 |
T45_03482 | T45_05611 | T45_03482 | T45_05611 | Hypothetical protein. | Hypothetical protein. | 0.709 |
T45_03805 | T45_02460 | T45_03805 | T45_02460 | Hypothetical protein. | PQQ enzyme repeat protein. | 0.477 |
T45_03805 | T45_02659 | T45_03805 | T45_02659 | Hypothetical protein. | Hypothetical protein. | 0.438 |
T45_03805 | T45_03482 | T45_03805 | T45_03482 | Hypothetical protein. | Hypothetical protein. | 0.509 |
T45_03805 | T45_03937 | T45_03805 | T45_03937 | Hypothetical protein. | Calcineurin-like phosphoesterase. | 0.485 |
T45_03805 | T45_05301 | T45_03805 | T45_05301 | Hypothetical protein. | Hypothetical protein. | 0.434 |
T45_03805 | T45_05611 | T45_03805 | T45_05611 | Hypothetical protein. | Hypothetical protein. | 0.519 |
T45_03805 | T45_06032 | T45_03805 | T45_06032 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.556 |
T45_03805 | arsB | T45_03805 | T45_03806 | Hypothetical protein. | Arsenical pump membrane protein. | 0.742 |
T45_03805 | cel1 | T45_03805 | T45_03802 | Hypothetical protein. | Cellulase 1 precursor. | 0.516 |
T45_03805 | rsbP_4 | T45_03805 | T45_03804 | Hypothetical protein. | Phosphoserine phosphatase RsbP. | 0.537 |
T45_03937 | T45_03805 | T45_03937 | T45_03805 | Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.485 |
T45_05301 | T45_02659 | T45_05301 | T45_02659 | Hypothetical protein. | Hypothetical protein. | 0.579 |
page 1 of 2