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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA_4Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (505 aa)    
Predicted Functional Partners:
lsrD
Autoinducer 2 import system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.987
lsrC
Autoinducer 2 import system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.984
rbsC_5
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.944
rbsB_5
D-ribose-binding periplasmic protein precursor; Belongs to the binding-protein-dependent transport system permease family.
  0.943
rbsC_4
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.941
lsrB
Autoinducer 2-binding protein LsrB precursor.
 
 0.941
yjfF_1
Inner membrane ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.939
ytfT_1
Inner membrane ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.930
rbsC_3
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  0.924
rbsC_1
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.923
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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