Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| barA_2 | gcvP | T45_05328 | T45_09295 | Signal transduction histidine-protein kinase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.878 |
| barA_2 | nifU | T45_05328 | T45_09242 | Signal transduction histidine-protein kinase. | NifU-like protein. | 0.797 |
| barA_2 | sufS | T45_05328 | T45_03925 | Signal transduction histidine-protein kinase. | Cysteine desulfurase. | 0.763 |
| barA_2 | trxB_1 | T45_05328 | T45_01299 | Signal transduction histidine-protein kinase. | Thioredoxin reductase. | 0.831 |
| barA_2 | trxB_3 | T45_05328 | T45_03619 | Signal transduction histidine-protein kinase. | Thioredoxin reductase. | 0.999 |
| egtC_1 | sufS | T45_05079 | T45_03925 | Amidohydrolase EgtC; Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine. | Cysteine desulfurase. | 0.697 |
| egtC_2 | sufS | T45_08808 | T45_03925 | Amidohydrolase EgtC. | Cysteine desulfurase. | 0.697 |
| gcvP | barA_2 | T45_09295 | T45_05328 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Signal transduction histidine-protein kinase. | 0.878 |
| gcvP | sufS | T45_09295 | T45_03925 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Cysteine desulfurase. | 0.833 |
| gcvP | trxB_1 | T45_09295 | T45_01299 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Thioredoxin reductase. | 0.869 |
| gcvP | trxB_3 | T45_09295 | T45_03619 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Thioredoxin reductase. | 0.927 |
| nifU | barA_2 | T45_09242 | T45_05328 | NifU-like protein. | Signal transduction histidine-protein kinase. | 0.797 |
| nifU | sufB | T45_09242 | T45_09247 | NifU-like protein. | FeS cluster assembly protein SufB. | 0.992 |
| nifU | sufD | T45_09242 | T45_09246 | NifU-like protein. | FeS cluster assembly protein SufD. | 0.996 |
| nifU | sufS | T45_09242 | T45_03925 | NifU-like protein. | Cysteine desulfurase. | 0.997 |
| nifU | trxB_1 | T45_09242 | T45_01299 | NifU-like protein. | Thioredoxin reductase. | 0.480 |
| nifU | trxB_3 | T45_09242 | T45_03619 | NifU-like protein. | Thioredoxin reductase. | 0.622 |
| nifU | yurY | T45_09242 | T45_09244 | NifU-like protein. | Vegetative protein 296. | 0.998 |
| sufB | nifU | T45_09247 | T45_09242 | FeS cluster assembly protein SufB. | NifU-like protein. | 0.992 |
| sufB | sufD | T45_09247 | T45_09246 | FeS cluster assembly protein SufB. | FeS cluster assembly protein SufD. | 0.916 |
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