Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| T45_00709 | camA_1 | T45_00709 | T45_00398 | Sarcosine oxidase, gamma subunit family. | Putidaredoxin reductase. | 0.978 |
| T45_00709 | gcvP | T45_00709 | T45_09295 | Sarcosine oxidase, gamma subunit family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.908 |
| T45_00709 | gltB_1 | T45_00709 | T45_04042 | Sarcosine oxidase, gamma subunit family. | Glutamate synthase [NADPH] large chain. | 0.912 |
| T45_00709 | hcaE_1 | T45_00709 | T45_00736 | Sarcosine oxidase, gamma subunit family. | 3-phenylpropionate/cinnamic acid dioxygenase. | 0.696 |
| T45_00709 | hcnC_2 | T45_00709 | T45_03959 | Sarcosine oxidase, gamma subunit family. | Hydrogen cyanide synthase subunit HcnC precursor. | 0.655 |
| T45_00709 | mlr_1 | T45_00709 | T45_00712 | Sarcosine oxidase, gamma subunit family. | 4-methylaminobutanoate oxidase; Belongs to the GcvT family. | 0.999 |
| T45_00709 | thcD_2 | T45_00709 | T45_03962 | Sarcosine oxidase, gamma subunit family. | Rhodocoxin reductase. | 0.978 |
| camA_1 | T45_00709 | T45_00398 | T45_00709 | Putidaredoxin reductase. | Sarcosine oxidase, gamma subunit family. | 0.978 |
| camA_1 | gcvP | T45_00398 | T45_09295 | Putidaredoxin reductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.885 |
| camA_1 | gltB_1 | T45_00398 | T45_04042 | Putidaredoxin reductase. | Glutamate synthase [NADPH] large chain. | 0.926 |
| camA_1 | hcaC_1 | T45_00398 | T45_00738 | Putidaredoxin reductase. | 3-phenylpropionate/cinnamic acid dioxygenase. | 0.966 |
| camA_1 | hcaC_2 | T45_00398 | T45_09245 | Putidaredoxin reductase. | 3-phenylpropionate/cinnamic acid dioxygenase. | 0.962 |
| camA_1 | hcaE_1 | T45_00398 | T45_00736 | Putidaredoxin reductase. | 3-phenylpropionate/cinnamic acid dioxygenase. | 0.870 |
| camA_1 | hcnC_2 | T45_00398 | T45_03959 | Putidaredoxin reductase. | Hydrogen cyanide synthase subunit HcnC precursor. | 0.793 |
| camA_1 | mlr_1 | T45_00398 | T45_00712 | Putidaredoxin reductase. | 4-methylaminobutanoate oxidase; Belongs to the GcvT family. | 0.966 |
| camA_1 | thcD_2 | T45_00398 | T45_03962 | Putidaredoxin reductase. | Rhodocoxin reductase. | 0.908 |
| camA_1 | thcD_3 | T45_00398 | T45_07151 | Putidaredoxin reductase. | Rhodocoxin reductase. | 0.881 |
| gcvP | T45_00709 | T45_09295 | T45_00709 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, gamma subunit family. | 0.908 |
| gcvP | camA_1 | T45_09295 | T45_00398 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putidaredoxin reductase. | 0.885 |
| gcvP | gltB_1 | T45_09295 | T45_04042 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase [NADPH] large chain. | 0.999 |
page 1 of 5