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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drrA_10Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. (323 aa)    
Predicted Functional Partners:
T45_04010
ABC-2 type transporter.
 
 
  0.926
drrB_5
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 0.776
T45_04008
NYN domain protein.
       0.762
T45_04011
Hypothetical protein.
 
     0.706
drrB_4
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 0.702
drrB_6
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 
 0.700
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.695
T45_04007
Hypothetical protein.
       0.680
drrB_2
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 0.670
drrB_1
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
  
 0.669
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.