Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
citECitrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. (282 aa)    
Predicted Functional Partners:
bbsF_3
succinyl-CoA:(R-benzylsuccinate CoA-transferase; Belongs to the CoA-transferase III family.
 
 
  0.931
T45_04038
ADP-ribosylglycohydrolase.
 
     0.920
T45_04037
ADP-ribosylglycohydrolase.
 
     0.914
T45_04039
ADP-ribosylglycohydrolase.
 
     0.902
mcl1
malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.891
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.846
korA
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.828
citG
2-(5''-triphosphoribosyl-3'-dephosphocoenzyme-A.
 
  
 0.822
paaZ
Bifunctional protein PaaZ.
 
 
 0.814
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 
 0.796
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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