STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csn_1Chitosanase precursor; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan. (280 aa)    
Predicted Functional Partners:
chtA
Chitinase 63 precursor; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.879
fruA
PTS system fructose-specific EIIABC component.
    
 0.844
chiC
Chitinase C precursor.
 
 
 0.754
csxA_1
exo-beta-D-glucosaminidase precursor.
     
 0.740
T45_06173
Endoglucanase E1 precursor.
    
 0.634
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.634
gdhB_1
Quinoprotein glucose dehydrogenase B precursor.
    
 0.613
yliI
Soluble aldose sugar dehydrogenase YliI.
    
 0.608
T45_04045
Von Willebrand factor type A domain protein.
       0.583
dinB_1
DNA polymerase IV.
    
   0.529
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.