Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ddc_1L-2,4-diaminobutyrate decarboxylase. (454 aa)    
Predicted Functional Partners:
iucD_1
L-lysine N6-monooxygenase.
 
   
 0.959
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.871
T45_04829
Putative lipid kinase.
   
 0.848
iucD_2
L-lysine N6-monooxygenase.
 
   
 0.826
T45_06353
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
 
 0.807
iucB_1
N(6)-hydroxylysine O-acetyltransferase.
 
  
 0.800
iucC
Aerobactin synthase.
 
  
 0.800
ppsE_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
  
  
 0.793
fas6_1
LOG family protein ORF6 in fasciation locus.
  
 
 0.788
dat_1
Diaminobutyrate-2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.780
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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