Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
T45_04074Hypothetical protein. (312 aa)    
Predicted Functional Partners:
T45_04829
Putative lipid kinase.
 
 
 0.805
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 0.768
plcN
Non-hemolytic phospholipase C precursor.
     
 0.693
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
  
  0.678
ydjZ
TVP38/TMEM64 family inner membrane protein YdjZ.
    
  0.644
pssA
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.632
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.631
estB_4
Extracellular esterase EstB precursor.
 
  
 0.616
T45_09038
Putative FAD-linked oxidoreductase.
    
  0.613
T45_01544
Alpha/beta hydrolase family protein.
  
  
 0.610
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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