Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_04088Hypothetical protein. (156 aa)    
Predicted Functional Partners:
ubiG_3
Ubiquinone biosynthesis O-methyltransferase.
 
     0.777
T45_04085
Hypothetical protein.
 
     0.756
T45_04084
Hypothetical protein.
    
  0.675
T45_02584
Pyridoxamine 5'-phosphate oxidase.
  
     0.567
T45_04087
MOSC domain protein.
       0.539
T45_09265
Hypothetical protein.
  
     0.534
T45_06159
Hypothetical protein.
  
   0.515
T45_06158
Hypothetical protein.
  
   0.506
T45_06447
Hypothetical protein.
  
     0.500
T45_04365
Hypothetical protein.
  
     0.488
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.