STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip_3Proline iminopeptidase; Belongs to the peptidase S33 family. (326 aa)    
Predicted Functional Partners:
pip_4
Proline iminopeptidase.
  
  
 
0.907
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.895
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.895
T45_02826
Proline racemase; Belongs to the proline racemase family.
     
 0.892
T45_04090
Uracil DNA glycosylase superfamily protein.
       0.789
lgrD_2
Linear gramicidin synthase subunit D.
   
 0.750
hslR
Heat shock protein 15.
       0.723
txtB
Thaxtomin synthase B.
   
 0.714
txtA
Thaxtomin synthase A.
   
 0.714
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
    
  0.663
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.