Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pip_3Proline iminopeptidase; Belongs to the peptidase S33 family. (326 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.902
pip_4
Proline iminopeptidase.
  
  
 
0.861
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.854
T45_02826
Proline racemase; Belongs to the proline racemase family.
     
  0.850
fadM_2
Proline dehydrogenase 1.
     
 0.850
T45_04090
Uracil DNA glycosylase superfamily protein.
       0.772
cmdD_1
Chondramide synthase cmdD.
    
 0.703
hslR
Heat shock protein 15.
       0.703
lgrD_2
Linear gramicidin synthase subunit D.
   
 0.698
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
    
  0.647
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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