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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_04110Carboxymuconolactone decarboxylase family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (170 aa)    
Predicted Functional Partners:
catD_4
3-oxoadipate enol-lactonase 2.
  
 
 0.763
gabR_3
HTH-type transcriptional regulatory protein.
 
     0.726
sigJ_2
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.626
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
     
  0.618
T45_03880
Carboxymuconolactone decarboxylase family.
  
 
 0.601
sigJ_1
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.600
sigJ_3
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.569
catD_2
3-oxoadipate enol-lactonase 2.
  
 
 0.546
sigJ_4
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.531
gabR_2
HTH-type transcriptional regulatory protein.
 
     0.445
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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