Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
chaASodium/proton antiporter ChaA. (366 aa)    
Predicted Functional Partners:
T45_04127
Hypothetical protein.
       0.702
nhaK
Sodium, potassium, lithium and rubidium/H(+) antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
 
 
 0.618
T45_02132
Calerythrin.
    
 
 0.618
T45_08744
EF hand.
    
 
 0.618
mgtA_1
Magnesium-transporting ATPase, P-type 1.
   
 
 0.601
T45_06160
Calcium-transporting ATPase 1.
   
 
 0.601
T45_06911
Hypothetical protein.
   
 
 0.601
yceD_6
General stress protein 16U.
       0.597
T45_00207
Sodium/hydrogen exchanger family protein.
    
 
 0.568
T45_01887
Zn-finger in ubiquitin-hydrolases and other.
    
 
 0.568
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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