Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gbhGuanidinobutyrase; Belongs to the arginase family. (337 aa)    
Predicted Functional Partners:
adiA
Biodegradative arginine decarboxylase.
    
 0.939
ilvB
Acetolactate synthase isozyme 1 large subunit; Belongs to the TPP enzyme family.
 
  
 0.921
aam_2
Acylamidase; Belongs to the amidase family.
    
  0.921
gatA_2
glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.921
gatA_3
glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
    
  0.921
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.897
gabT
4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.896
glnA_1
Putative glutamine synthetase 2.
 
  
 0.887
aguA
Agmatine deiminase.
    
 0.886
T45_05634
D-amino acid dehydrogenase small subunit.
 
 
 0.884
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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