Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kstR2_9HTH-type transcriptional repressor KstR2. (196 aa)    
Predicted Functional Partners:
T45_04167
methylmalonyl-CoA carboxyltransferase 12S subunit.
 
   
 0.838
yngG
hydroxymethylglutaryl-CoA lyase YngG.
     
 0.807
kstR2_3
HTH-type transcriptional repressor KstR2.
  
     0.623
mmgC_11
acyl-CoA dehydrogenase.
     
 0.602
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
   
 
 0.601
acrC_4
acryloyl-CoA reductase (NADH.
     
 0.553
T45_04163
Putative phosphatase.
       0.519
iucB_1
N(6)-hydroxylysine O-acetyltransferase.
       0.517
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
       0.515
viuB_2
Vibriobactin utilization protein ViuB.
       0.493
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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