Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_04167methylmalonyl-CoA carboxyltransferase 12S subunit. (538 aa)    
Predicted Functional Partners:
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 0.992
yngG
hydroxymethylglutaryl-CoA lyase YngG.
 
 0.978
accA1_3
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 0.969
accC
Biotin carboxylase.
  
 0.962
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 0.961
mmgC_11
acyl-CoA dehydrogenase.
 
 
 0.938
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.922
fadJ_2
Fatty acid oxidation complex subunit alpha.
  
 
 0.916
Acd_3
glutaryl-CoA dehydrogenase.
  
 
  0.892
mmgC_8
acyl-CoA dehydrogenase.
  
 
 0.887
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.