Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
viuB_2Vibriobactin utilization protein ViuB. (294 aa)    
Predicted Functional Partners:
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
  
 
 0.860
lagD
lactococcin-G-processing and transport.
   
  0.808
apxIB
Toxin RTX-I translocation ATP-binding protein.
   
  0.808
dhbF_8
Dimodular nonribosomal peptide synthase.
  
  
 0.742
iucC
Aerobactin synthase.
     
 0.716
iucB_1
N(6)-hydroxylysine O-acetyltransferase.
  
    0.713
yfiY
Putative siderophore-binding lipoprotein YfiY.
  
 
  0.691
yusV_1
Putative siderophore transport system.
 
 0.669
yhfQ
Putative ABC transporter substrate-binding.
 
 
 0.644
dhbB
Isochorismatase.
 
  
 0.628
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.