Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_04198Hypothetical protein. (175 aa)    
Predicted Functional Partners:
cpxA_1
Sensor protein CpxA.
 
     0.861
T45_08654
Hypothetical protein.
  
     0.699
T45_03327
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.697
T45_08389
Hypothetical protein.
  
     0.694
T45_02117
Hypothetical protein.
  
     0.691
mprA_1
Response regulator MprA.
 
     0.650
T45_03515
Hypothetical protein.
  
     0.642
T45_04918
Putative multidrug export ATP-binding/permease protein.
  
     0.639
T45_05403
Hypothetical protein.
  
     0.634
T45_02580
Hypothetical protein.
  
     0.627
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.