Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_04323RDD family protein. (225 aa)    
Predicted Functional Partners:
hslR
Heat shock protein 15.
  
    0.819
T45_04324
RDD family protein.
 
    
0.807
T45_04325
Streptomyces sporulation and cell division protein.
       0.642
T45_00550
Hypothetical protein.
  
     0.525
cwsA
Cell wall synthesis protein CwsA.
  
     0.516
T45_08983
Hypothetical protein.
  
     0.512
T45_00138
GDSL-like Lipase/Acylhydrolase.
  
     0.478
T45_07181
Hypothetical protein.
  
     0.469
T45_04596
Hypothetical protein.
  
     0.453
T45_01377
Hypothetical protein.
  
     0.452
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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