Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
bmr3_6Multidrug resistance protein 3. (495 aa)    
Predicted Functional Partners:
doc
Toxin Doc.
       0.805
T45_04338
Hypothetical protein.
       0.805
rgy
Reverse gyrase.
       0.702
bmr3_12
Multidrug resistance protein 3.
  
     0.634
kipR_2
HTH-type transcriptional regulator KipR.
       0.621
lon_3
Lon protease.
       0.603
stp_14
Multidrug resistance protein stp; Belongs to the major facilitator superfamily.
  
     0.532
stp_4
Multidrug resistance protein stp.
  
     0.519
cutS_2
Carbon monoxide dehydrogenase small chain.
       0.519
stp_8
Multidrug resistance protein stp; Belongs to the major facilitator superfamily.
  
    0.518
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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