STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutS_2Carbon monoxide dehydrogenase small chain. (571 aa)    
Predicted Functional Partners:
pucD_2
Putative xanthine dehydrogenase subunit D.
 0.996
pucD_1
Putative xanthine dehydrogenase subunit D.
 0.989
xdhA_4
Xanthine dehydrogenase molybdenum-binding subunit.
 0.981
cdhB
Caffeine dehydrogenase subunit beta.
 
  
  0.980
xdhA_2
Xanthine dehydrogenase molybdenum-binding subunit.
 0.958
xdhA_1
Xanthine dehydrogenase molybdenum-binding subunit.
 0.956
xdhA_3
Xanthine dehydrogenase molybdenum-binding subunit.
 0.955
coxM
Carbon monoxide dehydrogenase medium chain.
 0.954
ndhF
Nicotinate dehydrogenase FAD-subunit.
 0.949
iorB_2
Isoquinoline 1-oxidoreductase subunit beta.
 
 0.920
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.