Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
T45_04425Hypothetical protein. (1034 aa)    
Predicted Functional Partners:
xynAS9_2
Endo-1,4-beta-xylanase A precursor.
 
     0.869
T45_06769
GDSL-like Lipase/Acylhydrolase.
  
 
   0.753
bprV
Extracellular basic protease precursor.
   
 0.750
rhgT_1
Rhamnogalacturonan acetylesterase RhgT.
  
 
   0.730
xlnA_5
Endo-1,4-beta-xylanase A precursor.
 
     0.705
xlnA_7
Endo-1,4-beta-xylanase A precursor.
  
     0.703
abnA
Extracellular endo-alpha-(1->5-L-arabinanase 1; Belongs to the glycosyl hydrolase 43 family.
  
     0.694
xlnB
Endo-1,4-beta-xylanase B precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.683
rhgT_2
Rhamnogalacturonan acetylesterase RhgT.
  
 
   0.667
yteR
Unsaturated rhamnogalacturonyl hydrolase YteR.
  
     0.659
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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