STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bga_4Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family. (1222 aa)    
Predicted Functional Partners:
T45_04444
alpha-L-fucosidase.
 
  
  0.871
agaA_3
Alpha-galactosidase A precursor.
 
  
  0.854
T45_04446
GDSL-like Lipase/Acylhydrolase.
 
    0.829
T45_04445
NPCBM-associated, NEW3 domain of.
 
    0.819
T45_04442
Hypothetical protein.
 
     0.797
agaA_4
Alpha-galactosidase A precursor.
 
 
  0.795
T45_07588
Hypothetical protein.
 
  0.782
T45_04448
Hypothetical protein.
       0.773
mro_1
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
  
 
 0.764
mro_2
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
  
 
 0.764
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.