STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ethAFAD-containing monooxygenase EthA. (509 aa)    
Predicted Functional Partners:
hapE_1
4-hydroxyacetophenone monooxygenase.
  
  
 
0.831
hapE_2
4-hydroxyacetophenone monooxygenase.
  
  
 
0.830
virS
HTH-type transcriptional regulator VirS.
 
   
 0.759
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.726
T45_02132
Calerythrin.
    
   0.701
T45_08744
EF hand.
    
   0.701
fadJ_2
Fatty acid oxidation complex subunit alpha.
  
 
 
 0.687
catD_3
3-oxoadipate enol-lactonase 2.
 
 
 0.644
T45_01116
Hypothetical protein.
    
 
 0.604
rplQ
50S ribosomal protein L17.
   
   0.588
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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