STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh_1Alcohol dehydrogenase. (339 aa)    
Predicted Functional Partners:
fdm
Formaldehyde dismutase.
  
  
 
0.867
yjmD_1
Putative zinc-type alcohol dehydrogenase-like.
  
  
 
0.865
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.854
T45_02538
Alcohol dehydrogenase.
 
  0.815
yjmD_3
Putative zinc-type alcohol dehydrogenase-like.
  
     0.771
neoA_1
2-deoxy-scyllo-inosamine dehydrogenase.
  
     0.767
yjmD_2
Putative zinc-type alcohol dehydrogenase-like.
  
     0.757
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.739
T45_06861
Alcohol dehydrogenase.
  
  
  0.727
yxaF
Putative HTH-type transcriptional regulator.
       0.633
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.