Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
adh_1Alcohol dehydrogenase. (339 aa)    
Predicted Functional Partners:
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.827
T45_02538
Alcohol dehydrogenase.
 
  0.808
yjmD_3
Putative zinc-type alcohol dehydrogenase-like.
  
     0.771
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.770
neoA_1
2-deoxy-scyllo-inosamine dehydrogenase.
  
     0.767
yjmD_2
Putative zinc-type alcohol dehydrogenase-like.
  
     0.757
T45_06861
Alcohol dehydrogenase.
  
     0.718
acoA
Acetoin:2,6-dichlorophenolindophenol.
  
 
 0.657
pgm
Phosphoglucomutase.
   
 0.621
yxaF
Putative HTH-type transcriptional regulator.
       0.602
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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