Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
araN_6Putative arabinose-binding protein precursor. (440 aa)    
Predicted Functional Partners:
araQ_13
L-arabinose transport system permease protein.
 
  0.933
lacF_16
Lactose transport system permease protein LacF.
 
   0.926
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 0.886
araQ_14
L-arabinose transport system permease protein.
 
  0.828
araQ_21
L-arabinose transport system permease protein.
 
  0.826
araQ_22
L-arabinose transport system permease protein.
 
  0.819
araQ_4
L-arabinose transport system permease protein.
 
  0.817
araQ_7
L-arabinose transport system permease protein.
 
  0.815
lacF_7
Lactose transport system permease protein LacF.
 
   0.814
araQ_9
L-arabinose transport system permease protein.
 
  0.814
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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