Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xynB_4Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (537 aa)    
Predicted Functional Partners:
acoC_1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
       0.773
xylA_1
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.729
abnA
Extracellular endo-alpha-(1->5-L-arabinanase 1; Belongs to the glycosyl hydrolase 43 family.
  
     0.684
xyoA
Putative xylitol oxidase.
   
 
  0.582
T45_05443
L-gulono-1,4-lactone dehydrogenase.
   
 
  0.582
xynAS9_4
Endo-1,4-beta-xylanase A precursor.
 
 
 0.567
lacZ_4
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.532
wapA_7
tRNA nuclease WapA precursor.
       0.519
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.516
lacF_16
Lactose transport system permease protein LacF.
       0.509
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.