sigE_9 protein (Streptomyces turgidiscabies)

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Score

sigE_9

RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa)

Predicted Functional Partners:

pmt_2

0.794

T45_04499

0.769

rpoB_1

0.657

metG_2

0.561

rpoC

0.561

sigW_1

0.519

dapD

0.519

T45_09236

0.516

rpoZ

0.515

rpoA_1

0.508

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_04499	pmt_2	T45_04499	T45_04498	Hypothetical protein.	Putative dolichyl-phosphate-mannose--protein mannosyltransferase.	0.773
T45_04499	sigE_9	T45_04499	T45_04500	Hypothetical protein.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.769
T45_09236	dapD	T45_09236	T45_09237	Hypothetical protein.	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	0.741
T45_09236	sigE_9	T45_09236	T45_04500	Hypothetical protein.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.516
dapD	T45_09236	T45_09237	T45_09236	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	Hypothetical protein.	0.741
dapD	sigE_9	T45_09237	T45_04500	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.519
metG_2	rpoB_1	T45_01199	T45_07178	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.424
metG_2	sigE_9	T45_01199	T45_04500	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
pmt_2	T45_04499	T45_04498	T45_04499	Putative dolichyl-phosphate-mannose--protein mannosyltransferase.	Hypothetical protein.	0.773
pmt_2	sigE_9	T45_04498	T45_04500	Putative dolichyl-phosphate-mannose--protein mannosyltransferase.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.794
rpoA_1	rpoB_1	T45_04383	T45_07178	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA_1	rpoC	T45_04383	T45_07177	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA_1	rpoZ	T45_04383	T45_08441	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoA_1	sigE_9	T45_04383	T45_04500	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.508
rpoA_1	sigW_1	T45_04383	T45_00637	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigW.	0.508
rpoB_1	metG_2	T45_07178	T45_01199	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.424
rpoB_1	rpoA_1	T45_07178	T45_04383	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB_1	rpoC	T45_07178	T45_07177	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB_1	rpoZ	T45_07178	T45_08441	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoB_1	sigE_9	T45_07178	T45_04500	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.657