Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
csn_2Chitosanase precursor; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan. (271 aa)    
Predicted Functional Partners:
chtA
Chitinase 63 precursor; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.879
fruA
PTS system fructose-specific EIIABC component.
    
 0.844
chiC
Chitinase C precursor.
 
 
 0.755
csxA_1
exo-beta-D-glucosaminidase precursor.
     
 0.740
T45_06173
Endoglucanase E1 precursor.
    
 0.634
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.634
gdhB_1
Quinoprotein glucose dehydrogenase B precursor.
    
 0.613
yliI
Soluble aldose sugar dehydrogenase YliI.
    
 0.608
dinB_1
DNA polymerase IV.
    
   0.529
dinB_2
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
    
   0.529
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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