Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
T45_04508Hypothetical protein. (137 aa)    
Predicted Functional Partners:
T45_04509
HxlR-like helix-turn-helix.
       0.785
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
  
 
 0.644
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.644
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
  
 
 0.644
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
 
 0.644
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
  
 
 0.644
xylC_1
Benzaldehyde dehydrogenase [NAD(+)].
  
  
 0.600
dhbF_2
Dimodular nonribosomal peptide synthase.
  
   0.580
cca
CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
   0.556
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
  
 
 0.543
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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