Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
catA_2Catechol 1,2-dioxygenase. (260 aa)    
Predicted Functional Partners:
T45_02611
Hypothetical protein.
  
     0.623
T45_08028
Hypothetical protein.
  
     0.616
catD_2
3-oxoadipate enol-lactonase 2.
 
 
 0.613
catD_4
3-oxoadipate enol-lactonase 2.
 
 
 0.587
T45_02898
L-Ala-D/L-Glu epimerase.
  
 
 0.550
bphC_1
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
     
 0.547
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.516
T45_00093
Hypothetical protein.
  
     0.506
clcD_1
Carboxymethylenebutenolidase.
   
 
 0.485
tfdF
Maleylacetate reductase.
    
 0.485
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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