Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sugB_5Trehalose transport system permease protein. (273 aa)    
Predicted Functional Partners:
lacF_17
Lactose transport system permease protein LacF.
 
 0.992
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.980
msmE_10
Multiple sugar-binding protein precursor.
 
 0.964
lacF_8
Lactose transport system permease protein LacF.
 
 0.958
lacF_15
Lactose transport system permease protein LacF.
 
  0.958
ugpA_4
SN-glycerol 3-phosphate transport system permease.
 
 0.956
lacF_20
Lactose transport system permease protein LacF.
 
  0.953
araP_1
L-arabinose transport system permease protein.
 
  0.951
lacF_21
Lactose transport system permease protein LacF.
 
  0.902
lacF_11
Lactose transport system permease protein LacF.
 
  0.901
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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